https://mkdiro-o.r-universe.devRecent package updates in mkdiro-oR-universehttps://github.com/mkdiro-o.pnghttps://mkdiro-o.r-universe.devTue, 05 May 2026 04:35:50 GMTksankaran@wisc.edu (Kris Sankaran)The phylobar package supports interactive visualization of microbiome data by allowing a stacked barplot to be constructed using a guiding taxonomic or phylogenetic hierarchy. The package provides a strategy for collapsing and expanding the hierarchy to different levels of resolution and then for interactively "painting" the stacked barplot by placing the mouse over different subtrees. This makes it possible to interactively test different color palettes at different resolution and identify taxonomic groups with interesting variation before settling on a final stacked barplot. One advantage of the approach is that multiple levels of taxonomic resolution can be compared at once within the same view.https://github.com/r-universe/bioc/actions/runs/37448932238Tue, 05 May 2026 04:35:50 GMTphylobar0.99.12successhttps://bioc.r-universe.devhttps://github.com/bioc/phylobargetting_started.Rmdgetting_started.htmlGetting Started2026-02-23 17:13:372026-04-09 19:57:09taxonomies.Rmdtaxonomies.htmlBuilding Trees from Taxonomies2025-10-04 00:12:522026-04-26 19:29:38customizing_files.Rmdcustomizing_files.htmlCustomizing Style in phylobar2025-10-08 19:42:542026-04-07 16:45:38exporting.Rmdexporting.htmlExporting to Vector Graphics Format2025-09-17 23:29:432026-04-07 16:45:38global_patterns.Rmdglobal_patterns.htmlWorking with phyloseq and TreeSummarizedExperiment versions of the Global Patterns Dataset2025-09-13 17:11:182026-04-07 16:45:38atlas.Rmdatlas.htmlTipping Points in the Atlas 1006 Dataset2025-09-12 02:30:092026-04-07 16:45:38diet_analysis.Rmddiet_analysis.htmlDifferences in the Community Composition due to Diet2025-09-12 01:54:542026-04-07 16:45:38hfhs.Rmdhfhs.htmlThe effect of a high-fat high-sugar (HFHS) diet on the mouse microbiome2025-09-12 15:05:162026-04-23 21:32:52covid_immunology.Rmdcovid_immunology.htmlCell-type Hierarchy Informs COVID-19 Immunology2025-10-12 02:37:172026-04-23 21:57:52